Publications in reverse chronological order
2012
- Nepusz T., Yu H., Paccanaro A.: Detecting overlapping protein complexes in protein-protein interaction networks. Nature Methods 2012. Advance Online Publication.
- Yang H., Nepusz T., Paccanaro A.: Improving GO semantic similarity measures by exploring the ontology beneath the terms and modeling uncertainty. Bioinformatics 2012. In press.
- Négyessy L., Bányai M., Nepusz T., Bazsó F.: What makes the prefrontal cortex so appealing in the era of brain imaging? A network analytical perspective. Acta Biologica Hungarica 63(Suppl. 1):38–53, 2012.
- Nepusz T., Vicsek T.: Controlling edge dynamics in complex networks. 2012. Under review.
- Abbruscato P., Nepusz T., Mizzi L., Del Corvo M., Morandini P., Fumasoni I., Michel C., Paccanaro A., Guiderdoni E., Schaffrath U., Piffanelli P., Faivre-Rampant O.: OsWRKY22, a monocot WRKY gene, plays a role in the resistance response to blast. Molecular Plant Pathology 2012. In press.
- Nepusz T., Paccanaro A.: Structural pattern discovery in protein-protein interaction networks. Handbook of Bio- and Neuroinformatics, ed.: Irwin King, Kaizhu Huang. Springer, 2012. To appear.
2010
- Nepusz T., Sasidharan R., Paccanaro A.: SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale. BMC Bioinformatics 11:120, 2010.
- Petróczi A., Aidman E.V., Hussain I., Deshmukh N., Nepusz T., Uvacsek M., Tóth M., Barker J., Naughton D.P.: Virtue or pretense? Looking behind self-declared innocence in doping. PLoS ONE 5(5):e10457, 2010.
2009
- Nepusz T., Petróczi A., Naughton D.P.: Network analytical tool for monitoring global food safety highlights China. PLoS ONE 4(8):e6680, 2009.
- Nepusz T., Petróczi A., Naughton D.P.: Food alert patterns for metal contamination analyses in seafoods: Longitudinal and geographical perspectives. Environment International 35(7):1030–1033, 2009.
- Nepusz T., Négyessy L., Tusnády G., Bazsó F.: Reconstructing cortical networks: case of directed graphs with high level of reciprocity. Handbook of Large-scale Random Networks, ed.: Béla Bollobás, Róbert Kozma, Dezső Miklós. ISBN: 978‒3‒540‒69394‒9. Springer, 2009.
2008
- Petróczi A., Mazanov J., Nepusz T., Backhouse S.H., Naughton D.P.: Comfort in big numbers: Does over-estimation of doping prevalence in others indicate self-involvement? Journal of Occupational Medicine and Toxicology 3:19, 2008.
- Nepusz T., Petróczi A., Naughton D.P.: Worldwide food recall patterns over an eleven month period: a country perspective. BMC Public Health 8:308, 2008.
- Nepusz T.: Data Mining in Complex Networks: Fuzzy Communities and Missing Link Prediction. Ph.D. thesis, 2008.
- Négyessy L., Nepusz T., Zalányi L., Bazsó F.: Convergence and divergence are mostly reciprocated properties of the connections in the network of cortical areas. Proceedings of the Royal Society B: Biological Sciences 275:2403–2410, 2008.
- Petróczi A., Aidman E.V., Nepusz T.: Capturing doping attitudes by self-report declarations and implicit assessment: a methodology study. Substance Abuse Treatment, Prevention and Policy 3:9, 2008.
- Nepusz T., Petróczi A., Négyessy L., Bazsó F.: Fuzzy communities and the concept of bridgeness in complex networks. Physical Review E 77:016107, 2008.
2007
- Nepusz T., Bazsó F.: Maximum-likelihood methods for data mining in datasets represented by graphs. In: IEEE Proceedings of the 5th International Symposium on Intelligent Systems and Informatics, Subotica, Serbia, 24–25 August 2007, pp. 161–165, 2007.
- Nepusz T., Bazsó F.: Likelihood-based clustering of directed graphs. In: IEEE Proceedings of the 3rd International Symposium on Computational Intelligence and Intelligent Informatics, Agadir, Morocco, 28–30 March 2007, pp. 189–194, 2007.
2006
- Csárdi G., Nepusz T.: The igraph software package for complex network research. InterJournal, Complex Systems 1695, 2006.
- Petróczi A., Nepusz T., Bazsó F.: Measuring tie-strength in virtual social networks. Connections 27(2):49–57, 2006.
- Négyessy L., Nepusz T., Kocsis L., Bazsó F.: Prediction of the main cortical areas and connections involved in the tactile function of the visual cortex by network analysis. European Journal of Neuroscience 23(7):1919–1930, 2006.
2005
- Nepusz T.: Application of Movement Analysis in the Qualitative Assessment of Patients with Cerebrovascular Accident. M.Sc. thesis, 2005.
- Kovács Zs., Nepusz T., Hamar G.: Simple movement analyser for neurological applications. Kórház- és orvostechnika 43(1):3–8, 2005.
2004
- Herczeg E., Baumgartner I., Fazekas G., Kovács Zs., Nepusz T.: Application of a movement analyser system in the assessment of the hand movement of patients with one-sided palsy. Rehabilitáció 14(4):31–34, 2004.